Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1797

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219619 to 222270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222381 to 224884 10165 mRNA_1798: 10166 - KOG0725 Reductases with broad range of substrate specificities, at 225398 to 226777 10166

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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222,824 + 10165 mRNA_1797 0.18 0.4
222,829 + 10165 mRNA_1797 0.18 0.3
223,088 - 10165 mRNA_1797 0.28 -0.1
223,226 - 10165 mRNA_1797 0.34 -0.4
223,351 + 10165 mRNA_1797 0.39 -0.2
223,561 + 10165 mRNA_1797 0.47 -0.2
223,827 - 10165 mRNA_1797 0.58 -0.4
224,528 + 10165 mRNA_1797 0.86 -0.2
224,706 - 0.6
224,972 - -0.4
225,147 - -0.5
225,292 + 0.1
225,304 + -1.1
225,313 + -2.4
225,317 + -3.2
225,326 - 1.2
225,327 + -0.7
225,330 - -0.3
225,332 + 0.2
225,333 - -0.0
225,475 + -1.4
225,486 - -0.2
225,600 - 10166 mRNA_1798 0.15 -0.1
225,629 + 10166 mRNA_1798 0.17 1.3