Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1792

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1790: 10158 - Hypothetical Protein, at 212184 to 213881 10158 mRNA_1791: 10159 - Hypothetical Protein, at 214130 to 214450 10159 mRNA_1792: 10160 - Hypothetical Protein, at 214724 to 215217 10160 mRNA_1793: 10161 - K02867 RP-L11, MRPL11, rplK large subunit ribosomal protein L11, at 215281 to 215917 10161 mRNA_1794: 10162 - BLAST peroxisomal membrane anchor protein [Aspergillus ..., at 216016 to 217175 10162

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
214,016 - -0.3
214,019 + 0.2
214,162 - 10159 mRNA_1791 0.10 0.7
214,184 + 10159 mRNA_1791 0.17 1.8
214,190 - 10159 mRNA_1791 0.19 1.3
214,319 - 10159 mRNA_1791 0.59 0.4
214,323 - 10159 mRNA_1791 0.60 -2.6
214,328 - 10159 mRNA_1791 0.62 0.8
214,335 - 10159 mRNA_1791 0.64 1.4
214,336 - 10159 mRNA_1791 0.64 -0.3
214,336 - 10159 mRNA_1791 0.64 -0.5
214,337 + 10159 mRNA_1791 0.64 -0.0
214,347 + 10159 mRNA_1791 0.68 0.3
214,349 - 10159 mRNA_1791 0.68 -1.8
214,357 + 10159 mRNA_1791 0.71 0.0
214,367 + 10159 mRNA_1791 0.74 0.1
214,384 - 10159 mRNA_1791 0.79 3.0
214,461 - 2.5
214,467 + -2.7
214,473 - -0.1
214,484 - 1.4
214,485 + 2.3
214,486 + -0.2
214,520 - 0.4
214,549 - 1.0
214,628 - -0.4
214,772 - 1.8
214,786 - 10160 mRNA_1792 0.13 -0.9
214,925 - 10160 mRNA_1792 0.41 -2.7
215,096 - 10160 mRNA_1792 0.75 -0.7
215,096 - 10160 mRNA_1792 0.75 -1.3
215,107 - 10160 mRNA_1792 0.78 0.3
215,220 + -0.6
216,013 - -1.1
216,102 + -1.2
216,117 - 1.1
216,117 + 0.1