Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1784

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1784: 10152 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 201521 to 204096 10152 mRNA_1785: 10153 - K04077 groEL, HSPD1 chaperonin GroEL, at 204844 to 206779 10153

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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200,556 - 1.1
200,814 - -1.6
200,845 - -0.2
201,002 - 3.3
201,003 + -1.2
201,145 - 0.8
201,150 + 1.6
201,152 + -1.7
201,312 + 0.8
201,332 - 0.9
201,336 - 0.2
201,411 - 1.4
201,412 + 0.2
201,412 + 1.1
201,453 - -0.2
201,459 - 0.3
201,461 + 0.5
201,596 - -0.5
201,650 + 0.9
201,753 - -0.6
201,763 - 2.3
201,766 + -1.2
202,370 - 10152 mRNA_1784 0.33 1.6
202,579 - 10152 mRNA_1784 0.41 2.1
202,655 + 10152 mRNA_1784 0.44 0.7
203,005 + 10152 mRNA_1784 0.58 0.0
203,014 + 10152 mRNA_1784 0.58 -0.0
203,208 - 10152 mRNA_1784 0.65 -0.2
203,373 + 10152 mRNA_1784 0.72 -0.6
203,509 - 10152 mRNA_1784 0.77 0.0
203,634 - 10152 mRNA_1784 0.82 0.7
203,645 + 10152 mRNA_1784 0.82 -2.7
204,095 + -1.2
204,308 + 0.2
204,365 + -2.2
204,369 - -2.7
204,403 - 0.3