Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1770

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1769: 10137 - Interpro F-box-like 0, at 159108 to 161176 10137 mRNA_1770: 10138 - HMMPfam-F-box-like-PF12937, at 161532 to 163380 10138 mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163525 to 168544 10139

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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160,548 - 10137 mRNA_1769 0.70 0.2
160,594 - 10137 mRNA_1769 0.72 2.1
160,813 - 10137 mRNA_1769 0.82 0.7
160,821 + 10137 mRNA_1769 0.83 2.0
161,141 - -0.2
162,282 - 10138 mRNA_1770 0.41 0.2
162,870 - 10138 mRNA_1770 0.72 -0.2
162,879 - 10138 mRNA_1770 0.73 1.9
163,221 + 0.7
163,822 - 0.9