Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1766

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1766: 10134 - K03097 CSNK2A casein kinase II subunit alpha, at 151982 to 154408 10134 mRNA_1767: 10135 - HMMPfam-F-box-like-PF12937, at 154773 to 156142 10135

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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151,019 - -0.0
151,027 - -0.5
151,035 + -1.7
151,129 + -0.2
151,146 + -0.5
151,157 + -2.9
151,163 + 0.2
151,168 + -0.9
151,545 + 1.5
151,566 + -1.9
151,566 - -0.5
151,595 + 0.7
151,748 + 0.4
151,749 - -2.7
151,896 + -0.4
151,907 + -0.2
151,912 + 1.1
152,169 - 1.3
152,183 - -0.1
152,200 + -1.4
152,767 + 10134 mRNA_1766 0.32 0.7
152,782 - 10134 mRNA_1766 0.33 0.5
153,058 - 10134 mRNA_1766 0.44 0.9
153,247 - 10134 mRNA_1766 0.52 1.3
153,254 + 10134 mRNA_1766 0.52 -0.3
153,351 + 10134 mRNA_1766 0.56 1.6
153,649 - 10134 mRNA_1766 0.69 1.4
153,823 + 10134 mRNA_1766 0.76 0.8
153,876 + 10134 mRNA_1766 0.78 -0.1
153,942 + 10134 mRNA_1766 0.81 -1.7
154,279 - 1.6
154,316 + 0.3
154,510 + 0.3
154,553 - -0.5
154,553 - 0.5
154,553 - 1.5
154,634 + -0.3
154,640 + 0.3
154,676 - 0.7
154,984 - 10135 mRNA_1767 0.15 1.7
155,128 - 10135 mRNA_1767 0.26 0.6