Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1764

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1763: 10131 - Hypothetical Protein, at 145443 to 147690 10131 mRNA_1764: 10132 - KOG0867 Glutathione S-transferase, at 147844 to 149167 10132 mRNA_1765: 10133 - HMMPfam-FUN14 family-PF04930, at 149374 to 150218 10133

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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146,871 - 10131 mRNA_1763 0.64 1.9
146,928 + 10131 mRNA_1763 0.66 0.0
146,977 - 10131 mRNA_1763 0.68 -0.2
147,441 + 10131 mRNA_1763 0.89 0.1
147,460 + 10131 mRNA_1763 0.90 0.7
147,550 - 2.1
147,707 + -0.1
147,857 - 0.0
147,994 - 10132 mRNA_1764 0.11 0.9
148,605 + 10132 mRNA_1764 0.57 -0.6
148,781 + 10132 mRNA_1764 0.71 0.2
148,785 - 10132 mRNA_1764 0.71 0.1
148,791 + 10132 mRNA_1764 0.72 -0.7
148,858 + 10132 mRNA_1764 0.77 2.6
148,898 - 10132 mRNA_1764 0.80 2.5
149,051 - 0.1
149,057 - -0.9
149,072 + 2.6
149,215 - 0.4
149,218 + 0.1
149,239 - -0.4
149,250 - -2.4
149,263 + 0.2
149,272 + -0.6
149,359 + -0.2
149,457 + 0.1
149,684 + 10133 mRNA_1765 0.37 0.2
149,800 - 10133 mRNA_1765 0.50 0.6
149,801 + 10133 mRNA_1765 0.51 1.4
149,936 + 10133 mRNA_1765 0.67 1.1
149,962 - 10133 mRNA_1765 0.70 0.2
150,065 + 10133 mRNA_1765 0.82 0.7
150,117 + 10133 mRNA_1765 0.88 0.0