Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1726

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46697 to 49542 10093 mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50052 to 51969 10094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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49,111 + 10093 mRNA_1725 0.85 0.3
49,429 + -1.2
49,516 - 0.2
49,581 + 0.6
49,653 + -2.2
49,738 - -0.2
49,995 + -1.5
49,999 - 0.5
50,094 + -0.6
50,176 + -0.1
50,523 - 10094 mRNA_1726 0.25 -0.8
50,543 - 10094 mRNA_1726 0.26 -1.1
50,559 - 10094 mRNA_1726 0.26 -0.2
50,850 - 10094 mRNA_1726 0.42 0.2
50,919 + 10094 mRNA_1726 0.45 2.4
51,152 - 10094 mRNA_1726 0.57 -2.1
51,444 - 10094 mRNA_1726 0.73 -0.5
51,546 - 10094 mRNA_1726 0.78 -1.6
51,714 - 10094 mRNA_1726 0.87 0.8
51,718 - 10094 mRNA_1726 0.87 0.0
51,739 - 10094 mRNA_1726 0.88 -1.0
51,750 + 10094 mRNA_1726 0.89 -0.4
51,783 + 1.1
51,879 - 0.6
51,903 + 0.7
51,906 - 0.2
52,089 + 0.4
52,168 - 1.3
52,168 + -0.6
52,194 - -1.6
52,196 - -1.6
52,198 + 0.6
52,221 + -0.1
52,228 - -0.2
52,230 - 0.2
52,234 - -0.9
52,302 - -0.9
52,336 + 1.3
52,339 + -1.8
52,339 - -1.8
52,339 - -0.5
52,342 - 0.6
52,346 + 1.2
52,364 + 0.4
52,371 + -0.6
52,400 - 1.6
52,411 + -0.3
52,414 + -0.5
52,461 + 0.4
52,492 - 1.6
52,515 - 0.2
52,524 + -0.4
52,574 + -1.1
52,576 - -0.6
52,589 + -1.4
52,618 + -0.9
52,642 - -0.1
52,685 - -1.8
52,740 + 0.3
52,772 + 1.3