Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1710

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1709: 10077 - K16302 CNNM metal transporter CNNM, at 5028 to 7438 10077 mRNA_1710: 10078 - Hypothetical Protein, at 7999 to 8750 10078 mRNA_1711: 10079 - K01887 RARS, argS arginyl-tRNA synthetase, at 9070 to 11520 10079

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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7,174 + 10077 mRNA_1709 0.89 0.5
7,276 + 2.0
7,408 + 1.5
7,596 - 0.2
7,805 + -0.4
7,859 + -0.0
7,859 + 0.7
7,901 - 0.4
7,922 + -1.3
7,992 - -0.6
8,039 + -0.4
8,042 - -1.8
8,047 + 1.8
8,068 + 1.4
8,234 + 10078 mRNA_1710 0.31 1.0
8,331 + 10078 mRNA_1710 0.44 0.2
8,341 - 10078 mRNA_1710 0.45 -1.9
8,493 - 10078 mRNA_1710 0.66 -1.5
8,728 + -0.4
8,779 + 1.0
8,811 + -1.5
8,838 + -0.7
8,963 + -0.3
8,965 - 1.0