Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1692

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1692: 10060 - K20292 COG5 conserved oligomeric Golgi complex subunit 5, at 908144 to 911524 10060 mRNA_1693: 10061 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 911784 to 914454 10061

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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907,279 + -0.3
907,439 + -0.0
907,724 + 0.2
907,743 - 1.0
907,886 + -0.9
908,047 - -0.3
908,054 + -0.6
908,328 - 0.4
908,586 - 10060 mRNA_1692 0.13 0.1
908,645 + 10060 mRNA_1692 0.15 -0.6
908,906 + 10060 mRNA_1692 0.23 0.4
908,944 + 10060 mRNA_1692 0.24 1.2
909,024 - 10060 mRNA_1692 0.26 -1.2
909,218 - 10060 mRNA_1692 0.32 0.6
909,222 + 10060 mRNA_1692 0.32 0.1
909,376 + 10060 mRNA_1692 0.36 0.4
909,807 + 10060 mRNA_1692 0.49 -0.1
909,964 - 10060 mRNA_1692 0.54 -0.1
910,243 - 10060 mRNA_1692 0.62 -0.1
910,353 + 10060 mRNA_1692 0.65 -0.7
910,368 + 10060 mRNA_1692 0.66 0.7
910,478 + 10060 mRNA_1692 0.69 -0.1
910,516 + 10060 mRNA_1692 0.70 -2.6
910,700 - 10060 mRNA_1692 0.76 1.1
911,151 - 10060 mRNA_1692 0.89 -0.8
911,463 + 2.5
911,592 - 1.5
911,622 + 0.2
911,635 - -0.1
911,773 + 0.4
911,777 + 0.3
911,933 - -0.1
911,999 - 0.7
912,026 - -0.1
912,307 + 10061 mRNA_1693 0.20 -0.2
912,451 - 10061 mRNA_1693 0.25 1.0