Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1690

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1689: 10057 - KOG1286 Amino acid transporters, at 897050 to 899959 10057 mRNA_1690: 10058 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 900281 to 902715 10058

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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899,401 - 10057 mRNA_1689 0.81 1.1
899,708 + 1.3
899,864 + -1.7
900,288 + -0.4
900,723 - 10058 mRNA_1690 0.18 -0.3
901,034 - 10058 mRNA_1690 0.31 -0.9
901,631 + 10058 mRNA_1690 0.55 -1.6
901,869 - 10058 mRNA_1690 0.65 0.5
901,909 - 10058 mRNA_1690 0.67 0.6
902,225 - 10058 mRNA_1690 0.80 -0.5
902,471 - 10058 mRNA_1690 0.90 -0.7
902,715 - -0.6
902,740 - 0.7
902,743 - 0.2
902,752 + 0.4
902,758 - 3.3
902,891 - -1.9
902,898 - 1.6
902,915 - 1.1
903,628 - 1.8