Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1657

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1656: 10024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 821084 to 822700 10024 mRNA_1657: 10025 - K08286 E2.7.11.- protein-serine/threonine kinase, at 823190 to 825684 10025

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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822,768 - -0.7
822,774 + -2.0
822,783 + 0.6
822,790 - 0.2
822,916 + 1.2
822,918 - -0.1
822,925 + 0.4
822,933 - 0.1
823,236 + 1.0
824,343 + 10025 mRNA_1657 0.46 0.5
825,060 + 10025 mRNA_1657 0.75 0.4
825,215 - 10025 mRNA_1657 0.81 0.4
825,385 + 10025 mRNA_1657 0.88 0.7
825,493 - 0.6
825,974 - -1.5
826,107 + 1.1
826,109 - 1.0
826,116 + -0.5
826,139 - 1.9
826,260 + 0.3
826,273 + -2.4
826,442 + 0.5
826,452 - -0.0
826,454 + 0.1
826,456 + -1.2
826,462 - 0.3
826,463 - -0.2
826,464 + -1.8
826,464 + 0.6
826,469 + 0.0
826,575 - -0.1
826,590 + 1.4
826,598 - 2.8
826,601 + -0.9
826,618 + -0.7
826,624 + 1.8