Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1590

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1589: 9957 - Hypothetical Protein, at 666700 to 668966 9957 mRNA_1590: 9958 - KOG0586 Serine/threonine protein kinase, at 669702 to 673169 9958 mRNA_1591: 9959 - K01835 pgm phosphoglucomutase, at 673406 to 675711 9959

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
668,753 + -0.9
669,188 - 0.4
669,192 + -4.0
669,217 + 0.5
669,228 + -0.1
669,478 + 1.2
669,515 - -1.1
669,618 - 0.2
669,636 - -2.2
669,680 + 0.5
669,697 + 0.5
669,711 + 0.1
669,847 - 0.3
670,545 - 9958 mRNA_1590 0.24 1.6
670,896 - 9958 mRNA_1590 0.34 -0.9
671,111 - 9958 mRNA_1590 0.41 3.1
671,128 - 9958 mRNA_1590 0.41 0.9
671,596 - 9958 mRNA_1590 0.55 0.0
671,736 + 9958 mRNA_1590 0.59 0.6
671,848 - 9958 mRNA_1590 0.62 0.7
672,047 + 9958 mRNA_1590 0.68 0.7
672,469 + 9958 mRNA_1590 0.80 0.7
672,696 - 9958 mRNA_1590 0.86 0.4
672,837 - -0.6
673,130 + 0.7
673,144 - -0.6
673,170 - 0.1
673,199 + 1.2
673,221 + 1.9
673,286 + 0.1
673,290 + -0.5
673,291 - -1.1
673,295 + 1.4
673,298 + 0.8
673,303 - 1.4
673,315 + 1.8
673,316 + -0.2
673,321 + -0.1
673,322 - -1.4
673,328 - 0.5
673,337 - 0.2
673,340 - -1.5
673,343 - 0.9
673,350 - 2.6
673,350 + -0.5
673,350 + -0.2
673,352 + 0.4
673,357 + 0.9
673,357 + 1.7
673,366 + 0.2
673,481 - 0.8
673,482 + 0.4
673,492 - -0.1
673,493 + 0.7
673,510 + 3.6
673,511 + -0.8
673,633 + 0.2
673,634 - 1.5
673,652 + 9959 mRNA_1591 0.11 0.6
673,656 + 9959 mRNA_1591 0.11 -0.2
673,657 + 9959 mRNA_1591 0.11 -0.8
674,066 + 9959 mRNA_1591 0.29 2.0