Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1522

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1521: 9889 - HMMPfam-DNA polymerase delta, subunit 4-PF04081, at 501491 to 502163 9889 mRNA_1522: 9890 - K06685 MOB1, Mats MOB kinase activator 1, at 502826 to 504110 9890 mRNA_1523: 9891 - Hypothetical Protein, at 504257 to 504927 9891

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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501,993 + 9889 mRNA_1521 0.75 -1.1
502,138 - 0.0
502,143 + -0.3
502,147 + -2.6
502,169 - 0.1
502,170 + -0.5
502,171 - 0.4
502,314 + 1.2
502,440 - 1.7
502,441 + 0.3
502,451 + 0.1
502,457 - 1.2
502,475 + -0.4
502,575 - -0.8
502,609 + -0.1
502,611 + 1.5
502,626 + -0.2
502,899 + 0.3
503,455 - 9890 mRNA_1522 0.49 1.4
503,475 + 9890 mRNA_1522 0.51 1.3
503,478 - 9890 mRNA_1522 0.51 0.4
503,488 + 9890 mRNA_1522 0.52 0.8
503,611 + 9890 mRNA_1522 0.61 0.3
503,886 - 9890 mRNA_1522 0.82 0.6
504,058 + 1.5
504,075 - -1.0
504,212 + 0.7
504,353 - 9891 mRNA_1523 0.14 -0.1
504,362 - 9891 mRNA_1523 0.16 0.6
504,363 + 9891 mRNA_1523 0.16 1.3
504,367 - 9891 mRNA_1523 0.16 2.2
504,367 + 9891 mRNA_1523 0.16 -0.5
504,522 + 9891 mRNA_1523 0.39 2.3
504,806 - 9891 mRNA_1523 0.82 0.4
504,826 + 9891 mRNA_1523 0.85 1.0
505,105 + -0.2
505,107 + 0.2