Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1449

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313855 to 315152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315530 to 317378 9817 mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317721 to 321691 9818

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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314,952 + 9816 mRNA_1448 0.85 1.3
315,290 - 0.1
315,340 + -0.1
315,402 + -0.8
315,641 - -0.6
316,077 - 9817 mRNA_1449 0.30 0.0
316,091 + 9817 mRNA_1449 0.30 2.5
316,099 + 9817 mRNA_1449 0.31 -0.2
316,203 + 9817 mRNA_1449 0.36 1.3
316,827 + 9817 mRNA_1449 0.70 -0.7
316,952 - 9817 mRNA_1449 0.77 1.0
316,957 + 9817 mRNA_1449 0.77 2.2
316,977 + 9817 mRNA_1449 0.78 1.2
316,980 + 9817 mRNA_1449 0.78 0.9
316,980 + 9817 mRNA_1449 0.78 -0.2
317,144 + 9817 mRNA_1449 0.87 0.4
317,264 - -0.1
317,266 + 0.7
317,284 + 2.2
317,305 - 1.4
317,403 - -0.0
317,414 + 0.8
317,421 + 1.2
317,423 - -0.3
317,432 + 1.0
317,432 + 0.4
317,434 + 1.4
317,449 + 0.1
317,451 - 0.2
317,452 + -0.6
317,488 - -0.6
317,502 - 0.7
317,534 + -0.1
317,553 + -1.0
317,555 + -2.3
317,557 - 0.4
317,561 + 0.5
317,563 + 1.0
317,683 - -0.9