Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1440

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1439: 9807 - K03544 clpX, CLPX ATP-dependent Clp protease ATP-binding subunit ClpX, at 281812 to 284553 9807 mRNA_1440: 9808 - Hypothetical Protein, at 284752 to 285459 9808 mRNA_1441: 9809 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 285760 to 287814 9809

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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283,771 + 9807 mRNA_1439 0.71 0.4
283,809 + 9807 mRNA_1439 0.73 0.5
283,936 - 9807 mRNA_1439 0.77 0.0
284,343 - 1.3
284,363 + 0.5
284,625 - 0.9
284,688 - -1.2
284,810 - 0.4
285,088 + 9808 mRNA_1440 0.47 0.2
285,092 - 9808 mRNA_1440 0.48 -0.4
285,356 - 9808 mRNA_1440 0.85 0.5
285,645 + -0.7
285,689 + 0.7
285,999 + 9809 mRNA_1441 0.12 1.7
286,087 + 9809 mRNA_1441 0.16 -0.9
286,093 + 9809 mRNA_1441 0.16 0.1
286,109 + 9809 mRNA_1441 0.17 -1.9
286,125 + 9809 mRNA_1441 0.18 1.2
286,456 + 9809 mRNA_1441 0.34 1.1