Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1351

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1350: 9718 - KOG3376 Uncharacterized conserved protein, at 60182 to 60785 9718 mRNA_1351: 9719 - Hypothetical Protein, at 61226 to 65910 9719 mRNA_1352: 9720 - Hypothetical Protein, at 66471 to 67100 9720

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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60,317 + 9718 mRNA_1350 0.22 0.1
60,319 + 9718 mRNA_1350 0.23 -0.3
60,452 - 9718 mRNA_1350 0.45 0.6
60,892 + 1.7
61,038 - 0.5
61,050 + 2.2
61,054 + 0.4
61,150 + -1.2
61,209 + -1.1
61,304 + -0.1
61,334 - -0.3
61,404 - 1.2
61,458 - 1.2
61,480 - 0.5
61,493 + 1.4
61,772 - 9719 mRNA_1351 0.12 0.8
61,796 - 9719 mRNA_1351 0.12 -0.5
61,943 + 9719 mRNA_1351 0.15 0.6
61,953 + 9719 mRNA_1351 0.16 0.6
61,989 - 9719 mRNA_1351 0.16 2.0
62,249 - 9719 mRNA_1351 0.22 0.9
62,402 + 9719 mRNA_1351 0.25 0.9
62,499 - 9719 mRNA_1351 0.27 -1.1
62,630 + 9719 mRNA_1351 0.30 1.8
62,710 + 9719 mRNA_1351 0.32 1.9
62,711 + 9719 mRNA_1351 0.32 2.7
62,721 - 9719 mRNA_1351 0.32 0.5
62,777 + 9719 mRNA_1351 0.33 0.3
62,826 + 9719 mRNA_1351 0.34 0.5
63,009 + 9719 mRNA_1351 0.38 0.8
63,874 + 9719 mRNA_1351 0.57 1.8
64,009 - 9719 mRNA_1351 0.59 0.0
64,137 + 9719 mRNA_1351 0.62 0.6
64,157 + 9719 mRNA_1351 0.63 0.3
64,185 - 9719 mRNA_1351 0.63 -0.2
64,269 - 9719 mRNA_1351 0.65 0.2
64,320 + 9719 mRNA_1351 0.66 -0.1
64,385 + 9719 mRNA_1351 0.67 -0.5
64,443 + 9719 mRNA_1351 0.69 2.0
64,581 - 9719 mRNA_1351 0.72 1.7
64,693 - 9719 mRNA_1351 0.74 0.7
64,761 - 9719 mRNA_1351 0.75 0.7
64,869 - 9719 mRNA_1351 0.78 -0.9
64,905 - 9719 mRNA_1351 0.79 0.3
64,956 - 9719 mRNA_1351 0.80 -0.6
64,966 + 9719 mRNA_1351 0.80 0.8
65,138 - 9719 mRNA_1351 0.84 1.5
65,360 + 9719 mRNA_1351 0.88 -0.1
65,363 + 9719 mRNA_1351 0.88 -0.5
65,468 - 0.7
65,471 + 0.5
65,500 + 0.6
65,540 - 1.5
65,575 - -0.7
65,600 + 0.3
65,606 + 0.6
65,720 - 0.8
65,839 + 0.7
65,953 - -0.1
66,035 + 0.7
66,064 + 0.4
66,505 - 1.2
66,526 - 0.1
66,532 + -0.2
66,532 + 0.2
66,532 + -0.9
66,644 - 9720 mRNA_1352 0.27 -1.1
66,779 + 9720 mRNA_1352 0.49 0.7
66,783 - 9720 mRNA_1352 0.50 -1.0
66,874 - 9720 mRNA_1352 0.64 1.6