Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1342

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1341: 9709 - SUPERFAMILY--SSF52047, at 37179 to 38782 9709 mRNA_1342: 9710 - SUPERFAMILY--SSF52047, at 39256 to 40650 9710 mRNA_1343: 9711 - K00698 CHS1 chitin synthase, at 40770 to 45014 9711

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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38,287 + 9709 mRNA_1341 0.69 -0.0
38,300 + 9709 mRNA_1341 0.70 0.4
38,300 + 9709 mRNA_1341 0.70 0.5
38,434 - 9709 mRNA_1341 0.78 0.4
38,473 + 9709 mRNA_1341 0.81 1.5
38,566 - 9709 mRNA_1341 0.86 -1.0
38,839 + 1.0
38,881 + -0.4
39,018 - 1.3
39,021 - -0.4
39,175 + 0.2
39,272 - -0.0
39,321 - -1.5
39,374 + 2.2
39,405 + 9710 mRNA_1342 0.11 1.7
39,494 + 9710 mRNA_1342 0.17 -0.5
39,799 + 9710 mRNA_1342 0.39 2.4
40,048 - 9710 mRNA_1342 0.57 1.2
40,083 - 9710 mRNA_1342 0.59 0.6
40,409 - 9710 mRNA_1342 0.83 1.2
40,633 + 2.4
40,800 + 1.0
40,967 - -1.2
40,968 + 0.6
41,017 + 0.3
41,320 - 9711 mRNA_1343 0.13 0.8
41,595 - 9711 mRNA_1343 0.19 0.3