Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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821,706 - -0.9
821,717 - 0.5
821,730 + 0.7
821,744 + 0.5
821,748 + 0.8
821,752 - 0.4
821,755 + 1.8
821,764 + -0.5
821,835 + 1.0
821,887 + 0.2
821,911 + 0.1
821,919 + 0.6
821,919 + 0.0
821,921 + 0.5
821,922 - 1.0
821,923 - 0.5
821,923 + -0.1
821,924 + 0.3
821,927 + 0.1
821,928 + 0.5
821,929 - 0.6
821,931 + 0.4
821,939 - 0.9
821,940 - 0.4
821,941 - 0.6
821,941 + 1.2
821,965 + 0.3
821,970 - -2.7
821,975 - 0.7
821,983 - 0.8
821,996 - 0.0
822,000 - 0.4
822,004 - -0.4
822,005 - 0.5
822,091 - 1.0
822,179 - 0.1
822,180 + 0.9
822,189 - 0.0
822,208 - 1.8
822,214 - 1.7
822,214 - 0.5
822,231 - 0.3
822,235 - 0.3
822,242 + 0.5
822,242 + -1.3
822,249 + 0.5
822,250 + 0.2
822,257 - -1.3
822,259 + 1.0
822,262 + 0.2
822,266 - 1.3
822,375 + 0.7
822,377 + 2.4
823,107 - 9647 mRNA_1279 0.29 1.4
823,108 + 9647 mRNA_1279 0.29 0.7
823,119 + 9647 mRNA_1279 0.30 0.1
823,440 - 9647 mRNA_1279 0.50 0.0
823,448 + 9647 mRNA_1279 0.50 0.0
823,697 - 9647 mRNA_1279 0.65 -0.4
823,735 + 9647 mRNA_1279 0.68 0.3
824,015 + 9647 mRNA_1279 0.85 -0.0
824,386 - 3.3
824,792 - -0.6
824,796 + 0.6
824,800 + 2.8
824,821 + 1.6
824,821 + 0.5
824,866 + 0.1
824,874 - -0.5
824,874 + 2.0
824,894 + -0.3
825,013 + 1.6
825,046 - 0.9
825,053 + 0.7
825,054 - 0.1
825,095 - 1.0
825,116 - -0.2
825,141 + 2.7
825,141 + -2.4
825,178 - 0.2
825,184 - -0.5
825,190 + -0.4
825,191 - 0.4
825,193 - 0.1
825,198 + -0.7
825,200 - -1.1
825,206 + 0.6
825,211 + -0.1
825,211 + 2.2
825,224 - 0.7
825,241 - -0.7
825,243 + 0.8
825,244 - -0.0
825,245 - -0.3