Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1248

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1247: 9615 - Hypothetical Protein, at 745328 to 746839 9615 mRNA_1248: 9616 - KOG1289 Amino acid transporters, at 747049 to 750301 9616 mRNA_1249: 9617 - Hypothetical Protein, at 750828 to 752844 9617

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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746,143 + 9615 mRNA_1247 0.54 1.0
746,257 + 9615 mRNA_1247 0.61 -0.3
746,341 - 9615 mRNA_1247 0.67 0.9
746,380 + 9615 mRNA_1247 0.70 1.8
746,521 + 9615 mRNA_1247 0.79 0.5
746,831 - 1.3
747,123 + 0.6
747,147 + -2.5
747,251 + 0.0
747,491 - 9616 mRNA_1248 0.14 0.8
747,560 + 9616 mRNA_1248 0.16 0.2
747,573 + 9616 mRNA_1248 0.16 -0.0
747,694 + 9616 mRNA_1248 0.20 -0.1
747,702 + 9616 mRNA_1248 0.20 0.7
747,732 + 9616 mRNA_1248 0.21 -0.1
747,839 + 9616 mRNA_1248 0.24 1.3
747,988 + 9616 mRNA_1248 0.29 0.3
748,426 + 9616 mRNA_1248 0.42 1.0
748,729 + 9616 mRNA_1248 0.52 -0.1
748,887 - 9616 mRNA_1248 0.57 2.5
748,987 + 9616 mRNA_1248 0.60 0.7
749,315 + 9616 mRNA_1248 0.70 0.7
749,371 - 9616 mRNA_1248 0.71 0.9
749,440 + 9616 mRNA_1248 0.74 1.4
749,645 - 9616 mRNA_1248 0.80 0.8
749,745 - 9616 mRNA_1248 0.83 -0.2
749,801 + 9616 mRNA_1248 0.85 -0.6
749,881 + 9616 mRNA_1248 0.87 -1.3
749,913 - 9616 mRNA_1248 0.88 -1.1
749,932 - 9616 mRNA_1248 0.89 0.3
749,933 + 9616 mRNA_1248 0.89 0.0
750,023 - 0.8
750,056 - 0.6
750,125 - 0.6
750,154 - 0.4
750,158 - 1.0
750,184 - 2.0
750,204 - 1.2
750,213 - 1.8
750,217 - 0.7
750,220 + -0.2
750,226 - -1.6
750,328 - 0.2
750,469 + 0.7
750,496 - 0.9
750,506 + 0.6
750,559 + 0.1
750,570 + 1.0
750,660 + -0.3
750,690 + 0.3
750,824 + 0.2
750,838 - 0.9
751,275 + 9617 mRNA_1249 0.22 1.0