Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1060

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1059: 9427 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 300871 to 301562 9427 mRNA_1060: 9428 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 301806 to 307768 9428 mRNA_1061: 9429 - BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-..., at 308503 to 311284 9429

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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300,955 - 9427 mRNA_1059 0.12 -0.4
300,969 - 9427 mRNA_1059 0.14 0.5
300,971 + 9427 mRNA_1059 0.14 0.1
301,129 - 9427 mRNA_1059 0.37 -2.3
301,132 + 9427 mRNA_1059 0.38 -0.1
301,542 + 0.5
301,545 - -0.2
301,559 - -1.6
301,566 + 0.4
301,566 + 2.3
301,566 + -1.2
301,574 + 2.2
301,582 + -0.8
301,582 + 0.9
301,582 + -0.8
301,582 + -1.4
301,585 + -0.4
301,587 + 1.6
301,589 - 1.3
301,737 - -0.0
301,821 - -0.2
302,015 + 0.0
302,097 - 0.2
302,146 - 0.6
302,152 + -0.0
302,221 - 1.4
302,479 + 9428 mRNA_1060 0.11 0.5
302,506 - 9428 mRNA_1060 0.12 2.9
302,510 + 9428 mRNA_1060 0.12 2.2
302,554 + 9428 mRNA_1060 0.13 -0.1
302,604 - 9428 mRNA_1060 0.13 0.4
302,621 + 9428 mRNA_1060 0.14 1.9
302,718 + 9428 mRNA_1060 0.15 0.3
302,765 - 9428 mRNA_1060 0.16 0.7
302,773 + 9428 mRNA_1060 0.16 0.4
303,025 - 9428 mRNA_1060 0.20 0.5
303,039 + 9428 mRNA_1060 0.21 -0.8
303,056 + 9428 mRNA_1060 0.21 1.0
303,190 - 9428 mRNA_1060 0.23 2.2
303,196 - 9428 mRNA_1060 0.23 0.1
303,260 + 9428 mRNA_1060 0.24 -1.9
303,416 + 9428 mRNA_1060 0.27 1.2
303,458 + 9428 mRNA_1060 0.28 0.7
303,626 - 9428 mRNA_1060 0.31 0.3
303,663 - 9428 mRNA_1060 0.31 -0.1
303,663 - 9428 mRNA_1060 0.31 1.0
303,663 - 9428 mRNA_1060 0.31 0.3
303,663 - 9428 mRNA_1060 0.31 0.9
303,663 - 9428 mRNA_1060 0.31 0.4
303,663 - 9428 mRNA_1060 0.31 2.4
303,669 + 9428 mRNA_1060 0.31 0.3
303,669 + 9428 mRNA_1060 0.31 0.9
303,669 + 9428 mRNA_1060 0.31 2.3
303,669 + 9428 mRNA_1060 0.31 1.1
303,768 - 9428 mRNA_1060 0.33 0.4
303,795 - 9428 mRNA_1060 0.33 0.5
303,859 + 9428 mRNA_1060 0.34 1.2
303,900 - 9428 mRNA_1060 0.35 0.4
303,985 + 9428 mRNA_1060 0.37 1.6
304,171 + 9428 mRNA_1060 0.40 1.4
304,174 - 9428 mRNA_1060 0.40 0.1
304,289 + 9428 mRNA_1060 0.42 0.6
304,373 + 9428 mRNA_1060 0.43 0.4
304,651 - 9428 mRNA_1060 0.48 0.3
304,854 - 9428 mRNA_1060 0.51 0.7
304,971 + 9428 mRNA_1060 0.53 1.1
305,009 + 9428 mRNA_1060 0.54 1.3
305,110 - 9428 mRNA_1060 0.55 1.6
305,119 - 9428 mRNA_1060 0.56 2.3
305,141 - 9428 mRNA_1060 0.56 -0.5
305,351 + 9428 mRNA_1060 0.59 2.4
305,357 - 9428 mRNA_1060 0.60 2.6
305,391 - 9428 mRNA_1060 0.60 0.9
305,394 - 9428 mRNA_1060 0.60 -0.2
305,603 - 9428 mRNA_1060 0.64 1.2
305,819 + 9428 mRNA_1060 0.67 2.1
306,013 + 9428 mRNA_1060 0.71 -0.1
306,152 - 9428 mRNA_1060 0.73 0.0
306,193 - 9428 mRNA_1060 0.74 0.8
306,248 + 9428 mRNA_1060 0.74 0.7
306,673 + 9428 mRNA_1060 0.82 0.5
306,834 - 9428 mRNA_1060 0.84 2.1
307,274 - -0.5
307,284 + 0.6
307,322 - 0.9
307,550 - 1.1
307,837 - 1.4
307,850 + -0.3
307,861 - 0.3
307,965 - 0.8
308,021 - -0.4
308,152 - -0.1
308,283 + 0.3
308,334 + 0.3
308,619 - -0.1