Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1007

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1006: 9374 - KOG4569 Predicted lipase, at 188789 to 191273 9374 mRNA_1007: 9375 - HMMPfam-S1/P1 Nuclease-PF02265,SUPERFAMILY--SSF48537, at 191628 to 193033 9375 mRNA_1008: 9376 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 193375 to 193873 9376

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
190,635 + 9374 mRNA_1006 0.74 -1.5
190,782 + 9374 mRNA_1006 0.80 -0.7
190,919 + 9374 mRNA_1006 0.86 -0.5
190,941 + 9374 mRNA_1006 0.87 0.7
191,002 - 9374 mRNA_1006 0.89 0.8
191,165 + 0.5
191,619 + 0.4
192,239 + 9375 mRNA_1007 0.43 1.5
192,346 - 9375 mRNA_1007 0.51 0.6
192,491 - 9375 mRNA_1007 0.61 0.1
192,933 + -0.7
193,240 - -0.9
193,418 + 1.6
193,652 - 9376 mRNA_1008 0.56 -1.6
193,652 - 9376 mRNA_1008 0.56 -0.1
193,668 - 9376 mRNA_1008 0.59 1.7
193,680 + 9376 mRNA_1008 0.61 -0.4
193,806 - 9376 mRNA_1008 0.86 0.5
193,830 - -2.0
193,832 + 0.4
193,950 - 0.1
193,953 - 1.2
193,963 - -0.2
193,965 - 0.9
193,971 + 0.1
193,971 - -0.2
193,974 - -0.6
193,974 - -3.4
193,975 + 0.4
193,978 - -0.5
193,988 - 0.4
193,990 + 0.1
194,000 + -0.6