Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_964

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_963: 9331 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 84124 to 85910 9331 mRNA_964: 9332 - Hypothetical Protein, at 86721 to 89416 9332 mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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85,857 - -0.7
85,974 - 1.0
85,975 + 0.1
85,986 + -1.2
85,991 - -0.7
86,007 + 1.4
86,013 + -0.0
86,013 + 0.5
86,019 + 0.7
86,022 + 1.1
86,073 - 2.6
86,083 - 0.1
86,089 - -0.1
86,090 + 0.8
86,094 + 0.3
86,095 + 0.6
86,097 + -0.6
86,104 - 0.2
86,108 + 0.4
86,119 + 1.1
86,124 - 0.9
86,130 + 0.4
86,132 + 1.3
86,133 + -0.6
86,138 - -0.6
86,140 - 0.5
86,266 + -0.9
86,420 + 1.6
86,477 + 1.5
86,595 + 1.0
86,661 + 0.3
86,881 + -0.2
87,150 + 9332 mRNA_964 0.16 -1.1
87,158 - 9332 mRNA_964 0.16 1.1
87,176 - 9332 mRNA_964 0.17 0.5
87,348 - 9332 mRNA_964 0.23 -0.2
87,650 - 9332 mRNA_964 0.34 0.2
87,910 + 9332 mRNA_964 0.44 0.2
88,019 + 9332 mRNA_964 0.48 0.3
88,039 + 9332 mRNA_964 0.49 -0.6
88,066 - 9332 mRNA_964 0.50 0.7
88,188 + 9332 mRNA_964 0.54 0.1
88,193 + 9332 mRNA_964 0.55 1.2
88,199 + 9332 mRNA_964 0.55 -0.8
88,592 - 9332 mRNA_964 0.69 0.6
88,595 + 9332 mRNA_964 0.70 1.2
88,741 + 9332 mRNA_964 0.75 0.3
88,859 - 9332 mRNA_964 0.79 1.0
88,882 + 9332 mRNA_964 0.80 1.4
89,065 - 9332 mRNA_964 0.87 0.4
89,170 + -0.0
89,229 - -0.6
89,508 - 0.7
89,684 + -1.0
89,863 - 1.7
89,949 + 1.1
90,054 - 0.7
90,054 + 1.6
90,189 + 0.7
90,191 - -0.4
90,336 - 9333 mRNA_965 0.19 2.1