Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_816

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_815: 9183 - K04555 UBE2G2, UBC7 ubiquitin-conjugating enzyme E2 G2, at 1941867 to 1942865 9183 mRNA_816: 9184 - KOG0783 Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains, at 1943601 to 1948343 9184 mRNA_817: 9185 - K02208 CDK8_11 cyclin-dependent kinase 8/11, at 1948708 to 1950488 9185

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,943,087 + -0.3
1,943,089 + 0.8
1,943,394 - 0.7
1,943,397 + 0.3
1,943,530 - 0.2
1,943,540 - -0.7
1,943,687 - 1.1
1,943,812 - -0.1
1,943,813 - -0.3
1,943,826 - 0.0
1,943,835 + -0.0
1,943,846 + 0.5
1,943,956 + -0.4
1,944,413 - 9184 mRNA_816 0.17 0.0
1,944,439 + 9184 mRNA_816 0.18 1.2
1,944,524 + 9184 mRNA_816 0.19 3.5
1,944,561 - 9184 mRNA_816 0.20 -0.5
1,944,842 - 9184 mRNA_816 0.26 1.6
1,945,147 + 9184 mRNA_816 0.33 0.3
1,945,281 - 9184 mRNA_816 0.35 0.1
1,945,373 - 9184 mRNA_816 0.37 1.2
1,945,730 - 9184 mRNA_816 0.45 1.2
1,945,884 + 9184 mRNA_816 0.48 0.5
1,946,056 + 9184 mRNA_816 0.52 0.6
1,946,207 - 9184 mRNA_816 0.55 1.6
1,946,270 + 9184 mRNA_816 0.56 -0.5
1,946,431 + 9184 mRNA_816 0.60 1.2
1,946,756 - 9184 mRNA_816 0.67 1.8
1,946,837 - 9184 mRNA_816 0.68 0.8
1,946,890 + 9184 mRNA_816 0.69 0.5
1,947,058 + 9184 mRNA_816 0.73 -0.2
1,947,193 - 9184 mRNA_816 0.76 -0.2
1,947,355 + 9184 mRNA_816 0.79 -0.9
1,947,373 - 9184 mRNA_816 0.80 0.5
1,947,651 - 9184 mRNA_816 0.85 0.8
1,947,803 + 9184 mRNA_816 0.89 1.2
1,948,188 - 0.8
1,948,288 - -0.1
1,948,292 - 0.1
1,948,550 - -0.0
1,948,565 - 0.9
1,948,706 + 0.7
1,949,025 + 9185 mRNA_817 0.18 -0.7