Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_773

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_771: 9139 - KOG0254 Predicted transporter (major facilitator superfamily), at 1837244 to 1837694 9139 mRNA_772: 9140 - Hypothetical Protein, at 1837682 to 1837975 9140 mRNA_773: 9141 - BLAST alpha,alpha-trehalase [Microbotryum lychnidis-dioicae..., at 1838436 to 1839062 9141

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,837,612 - 9139 mRNA_771 0.82 0.2
1,837,874 + 9140 mRNA_772 0.65 -0.0
1,837,906 + 9140 mRNA_772 0.76 1.5
1,838,047 - -0.1
1,838,051 - 0.3
1,838,068 - 0.4
1,838,068 + -0.2
1,838,070 + -0.3
1,838,071 + 1.5
1,838,074 - 2.1
1,838,085 - -3.2
1,838,088 - 0.0
1,838,090 + 1.1
1,838,090 + 0.4
1,838,090 + 0.2
1,838,090 + -0.3
1,838,090 + 0.1
1,838,090 - 0.3
1,838,091 - -0.1
1,838,094 + -0.1
1,838,094 + 0.7
1,838,171 + 0.3
1,838,219 - 1.6
1,838,220 - 0.5
1,838,222 + -0.0
1,838,230 - -1.0
1,838,233 + -0.5
1,838,373 + 0.8
1,838,508 + 9141 mRNA_773 0.11 0.7
1,838,510 + 9141 mRNA_773 0.12 1.2
1,838,563 - 9141 mRNA_773 0.20 0.4
1,838,662 - 9141 mRNA_773 0.36 0.0
1,838,961 - 9141 mRNA_773 0.84 0.1
1,839,079 - 0.5
1,839,089 + 0.9
1,839,097 + 0.6
1,839,107 + 0.8
1,839,256 - 0.9
1,839,257 + -1.0
1,839,271 + 1.7
1,839,315 + 0.5
1,839,394 - 0.2
1,839,401 + 0.9
1,839,403 + -0.0
1,839,404 - -0.2
1,839,430 - -0.3
1,839,464 + 0.6
1,839,471 + 0.7
1,839,475 + 0.0
1,839,503 - 0.6
1,839,510 + 1.2
1,839,515 + 1.1
1,839,646 + 0.2
1,839,686 + 0.1