Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_753

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_752: 9120 - K12822 RBM25, S164 RNA-binding protein 25, at 1795161 to 1797625 9120 mRNA_753: 9121 - K02737 PSMB5 20S proteasome subunit beta 5, at 1798377 to 1799752 9121 mRNA_754: 9122 - KOG0143 Iron/ascorbate family oxidoreductases, at 1800031 to 1801635 9122

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,797,558 + 0.6
1,797,558 - 1.6
1,797,573 - -0.6
1,797,573 + -0.3
1,797,581 - 0.9
1,797,799 + -0.4
1,797,876 + 0.9
1,797,963 - -0.2
1,798,130 + 0.1
1,798,151 + 0.6
1,798,206 + 0.7
1,798,313 + -0.2
1,798,752 + 9121 mRNA_753 0.27 1.2
1,799,048 + 9121 mRNA_753 0.49 1.2
1,799,428 - 9121 mRNA_753 0.76 1.8
1,799,733 - 0.5
1,799,812 - 0.0
1,799,831 + -1.1
1,799,897 - 0.9
1,799,898 - -0.0
1,799,899 - 1.8
1,799,904 - 0.1
1,799,914 - 1.0
1,799,915 - -2.9
1,799,921 - -1.3
1,799,922 + -0.2
1,799,924 + 2.0
1,799,924 + 0.3
1,799,931 + 0.2
1,799,933 + 0.4
1,799,936 + -0.4
1,799,936 + 1.5
1,799,937 + 0.9
1,799,941 + -0.1
1,799,960 - 0.4
1,800,045 + 0.0
1,800,340 - 9122 mRNA_754 0.19 0.0
1,800,514 - 9122 mRNA_754 0.30 -0.7