Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_668

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_667: 9035 - Interpro Ribosome associated membrane protein RAMP4, at 1608200 to 1608918 9035 mRNA_668: 9036 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1609196 to 1610811 9036 mRNA_669: 9037 - K01689 ENO, eno enolase, at 1611479 to 1614227 9037

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,608,270 + 0.3
1,608,373 - 9035 mRNA_667 0.24 0.2
1,608,394 - 9035 mRNA_667 0.27 -1.1
1,608,398 - 9035 mRNA_667 0.28 -1.0
1,608,402 - 9035 mRNA_667 0.28 0.0
1,608,412 + 9035 mRNA_667 0.29 0.8
1,608,473 + 9035 mRNA_667 0.38 0.1
1,608,541 - 9035 mRNA_667 0.47 0.7
1,608,545 - 9035 mRNA_667 0.48 -0.5
1,608,557 + 9035 mRNA_667 0.50 -0.9
1,608,694 - 9035 mRNA_667 0.69 0.1
1,609,010 + -0.3
1,609,051 + -0.6
1,609,132 - 2.9
1,609,144 + -1.0
1,609,162 - 1.7
1,609,179 + 0.9
1,609,288 + -0.0
1,609,321 - 1.0
1,609,381 - 9036 mRNA_668 0.11 -0.5
1,609,530 - 9036 mRNA_668 0.21 0.3
1,609,601 + 9036 mRNA_668 0.25 -0.6
1,609,603 - 9036 mRNA_668 0.25 0.6
1,609,739 - 9036 mRNA_668 0.34 0.8
1,609,938 - 9036 mRNA_668 0.46 -0.3
1,610,161 - 9036 mRNA_668 0.60 1.7
1,610,164 - 9036 mRNA_668 0.60 -0.2
1,610,209 - 9036 mRNA_668 0.63 1.4
1,610,568 - 9036 mRNA_668 0.85 0.7
1,610,578 + 9036 mRNA_668 0.86 0.3
1,610,579 + 9036 mRNA_668 0.86 1.4
1,610,603 + 9036 mRNA_668 0.87 -1.4
1,610,725 - 0.4
1,610,827 - 0.7
1,610,859 - 2.2
1,610,893 + 0.1
1,610,915 - 0.8
1,610,932 - 0.3
1,611,075 + 0.4
1,611,192 + 0.4
1,611,192 + -0.7
1,611,192 - 0.7
1,611,243 + 0.2
1,611,348 + 0.8
1,611,444 - -2.6
1,611,450 + 0.2
1,611,453 - -0.2
1,611,458 + 0.5
1,611,460 + 0.1
1,611,498 - 0.9
1,611,504 - 0.9
1,611,507 + 0.3
1,611,512 - 0.2
1,611,569 - 0.7
1,611,617 + 1.0
1,611,624 - 0.2
1,611,645 + 1.3
1,611,664 + 0.6
1,611,664 - 0.4