Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_607

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_606: 8974 - K06867 K06867 uncharacterized protein, at 1457249 to 1458122 8974 mRNA_607: 8975 - K00140 mmsA, iolA, ALDH6A1 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase, at 1458392 to 1460964 8975

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,458,503 - 0.6
1,458,648 + 0.8
1,458,787 + 8975 mRNA_607 0.15 0.2
1,458,792 - 8975 mRNA_607 0.16 0.4
1,458,967 + 8975 mRNA_607 0.22 -1.7
1,459,071 + 8975 mRNA_607 0.26 -0.1
1,459,360 - 8975 mRNA_607 0.38 1.0
1,459,816 - 8975 mRNA_607 0.55 1.5
1,459,834 + 8975 mRNA_607 0.56 -0.5
1,459,836 + 8975 mRNA_607 0.56 0.6
1,460,117 - 8975 mRNA_607 0.67 -1.3
1,460,553 - 8975 mRNA_607 0.84 0.4
1,460,726 + 1.5
1,460,844 - 2.6
1,460,845 - -1.7
1,460,850 + -0.5
1,460,855 + 1.1
1,460,877 + 0.1
1,460,880 - 0.3
1,460,999 + 2.1
1,461,001 + -0.1
1,461,002 - 0.7
1,461,004 - 1.3
1,461,006 - 0.6
1,461,007 - 0.3
1,461,008 - 1.7
1,461,010 - 1.3
1,461,011 + 0.1
1,461,014 - 0.5
1,461,015 + -0.5
1,461,020 - -0.3
1,461,020 - -1.3
1,461,021 - 0.1
1,461,032 - 1.4
1,461,033 - 2.5
1,461,033 - -0.0
1,461,043 + -0.1
1,461,064 + 0.3
1,461,478 - 2.9
1,461,623 + 0.4
1,461,767 - -0.5
1,461,768 + -1.2
1,461,776 - -0.3
1,461,776 - -0.6
1,461,792 + 1.0
1,461,794 - -0.1