Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_525

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_524: 8892 - KOG0519 Sensory transduction histidine kinase, at 1249927 to 1253514 8892 mRNA_525: 8893 - K01265 map methionyl aminopeptidase, at 1253926 to 1255834 8893 mRNA_526: 8894 - K02915 RP-L34e, RPL34 large subunit ribosomal protein L34e, at 1256147 to 1256994 8894

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,253,504 - 0.3
1,253,593 - 1.7
1,253,793 + 1.2
1,254,524 - 8893 mRNA_525 0.31 2.1
1,254,791 - 8893 mRNA_525 0.45 1.2
1,254,842 - 8893 mRNA_525 0.48 0.5
1,254,949 - 8893 mRNA_525 0.54 0.7
1,255,262 - 8893 mRNA_525 0.70 0.0
1,255,375 - 8893 mRNA_525 0.76 -0.6
1,255,406 + 8893 mRNA_525 0.78 0.5
1,255,541 + 8893 mRNA_525 0.85 0.6
1,255,692 - 0.8
1,255,701 + 1.6
1,255,702 + 0.9
1,255,824 - 1.1
1,256,006 - 0.8
1,256,014 + -0.7
1,256,015 + -0.4
1,256,030 - -0.0
1,256,408 + 8894 mRNA_526 0.31 1.7