Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_455

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_454: 8822 - Hypothetical Protein, at 1057192 to 1059678 8822 mRNA_455: 8823 - KOG1745 Histones H3 and H4, at 1060190 to 1060901 8823

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,059,243 + 8822 mRNA_454 0.82 0.1
1,059,358 - 8822 mRNA_454 0.87 2.3
1,060,029 - -3.0
1,060,176 - 0.1
1,060,181 - 1.2
1,060,320 + 8823 mRNA_455 0.18 2.4
1,060,798 + 8823 mRNA_455 0.85 0.4
1,061,092 - -0.2
1,061,243 - 0.7
1,061,244 + -0.3
1,061,327 - 0.2
1,061,348 - 2.6
1,061,384 + -0.6
1,061,494 + 0.8
1,061,499 - -0.7
1,061,511 + 0.3
1,061,515 + 0.9
1,061,523 - -0.2
1,061,548 + -1.0
1,061,570 - -0.3
1,061,571 + -0.2
1,061,579 - 0.7
1,061,579 - 0.5
1,061,611 - 0.6
1,061,616 - 0.1
1,061,617 - 0.6
1,061,624 - -0.9
1,061,631 + 1.1
1,061,633 - 0.4
1,061,657 + 1.3
1,061,659 - -0.3
1,061,660 - 0.2
1,061,670 + 0.2
1,061,671 + 1.0
1,061,676 + 0.7
1,061,698 - 1.4
1,061,722 + 0.2
1,061,759 - 1.0
1,061,767 + 1.8
1,061,777 - -0.7
1,061,782 - 0.2
1,061,801 + 0.6
1,061,806 - 0.0
1,061,809 - -0.1
1,061,809 - 0.2
1,061,810 - 0.7
1,061,812 + 0.5
1,061,813 + 0.4
1,061,814 + -0.2
1,061,814 + 0.1
1,061,828 - 0.4
1,061,837 + 1.8
1,061,838 - 0.1
1,061,847 + 1.1
1,061,848 + -0.0
1,061,850 + 0.8
1,061,850 - 0.7
1,061,854 - 0.3
1,061,866 - 0.3
1,061,867 - 0.9
1,061,871 + 0.7
1,061,877 + 0.8