Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_174

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423243 to 425969 8541 mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426426 to 428792 8542 mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429470 to 431854 8543

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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425,700 - 0.4
425,883 + 1.1
425,986 - -1.0
426,012 + -0.2
426,034 - 0.6
426,141 + 0.7
426,165 - 1.0
426,589 - 0.7
426,947 + 8542 mRNA_174 0.22 0.3
427,353 + 8542 mRNA_174 0.39 2.1
427,362 - 8542 mRNA_174 0.40 0.8
428,074 - 8542 mRNA_174 0.70 -0.2
428,550 + 8542 mRNA_174 0.90 0.8
429,227 + 0.6