Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_173

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_172: 8540 - K14264 BNA3 kynurenine aminotransferase, at 421100 to 422861 8540 mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423243 to 425969 8541 mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426426 to 428792 8542

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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422,372 - 8540 mRNA_172 0.72 0.1
422,392 + 8540 mRNA_172 0.73 0.5
422,666 - 8540 mRNA_172 0.89 -1.6
422,678 + 8540 mRNA_172 0.90 2.2
422,822 + -0.1
423,118 - 0.1
423,758 - 8541 mRNA_173 0.19 0.3
424,152 - 8541 mRNA_173 0.33 0.8
424,292 + 8541 mRNA_173 0.38 1.2
424,435 - 8541 mRNA_173 0.44 0.6
424,442 - 8541 mRNA_173 0.44 0.8
424,872 - 8541 mRNA_173 0.60 0.5
425,170 - 8541 mRNA_173 0.71 0.3
425,700 - 0.4
425,883 + 1.1
425,986 - -1.0
426,012 + -0.2
426,034 - 0.6
426,141 + 0.7
426,165 - 1.0
426,589 - 0.7
426,947 + 8542 mRNA_174 0.22 0.3