Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_102

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_101: 8469 - K18719 NUP82 nucleoporin NUP82, at 243748 to 246867 8469 mRNA_102: 8470 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 247531 to 248783 8470 mRNA_103: 8471 - Hypothetical Protein, at 248905 to 249863 8471

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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246,765 + 0.9
246,820 + -0.7
246,821 - -1.3
247,050 + 0.9
247,075 - 1.6
247,094 - 0.2
247,125 + -0.6
247,146 - -0.1
247,147 - 0.1
247,147 + 0.4
247,164 + 1.0
247,165 - 0.6
247,170 + 1.4
247,180 + 2.1
247,762 + 8470 mRNA_102 0.18 -0.8
247,948 - 8470 mRNA_102 0.33 0.3
248,083 - 8470 mRNA_102 0.44 -1.2
248,427 - 8470 mRNA_102 0.72 1.2
248,432 - 8470 mRNA_102 0.72 0.8
248,579 + 8470 mRNA_102 0.84 -0.3
248,657 + 8470 mRNA_102 0.90 1.5
248,664 + 1.3
248,677 + 1.2
248,744 + 2.0
248,752 + -0.3
249,020 - 8471 mRNA_103 0.12 -0.8
249,179 - 8471 mRNA_103 0.29 1.4
249,180 - 8471 mRNA_103 0.29 -0.3
249,257 - 8471 mRNA_103 0.37 -0.2
249,294 + 8471 mRNA_103 0.41 1.2
249,356 + 8471 mRNA_103 0.47 0.1
249,626 - 8471 mRNA_103 0.75 1.1
249,667 + 8471 mRNA_103 0.79 -1.0
249,692 - 8471 mRNA_103 0.82 0.4
249,740 + 8471 mRNA_103 0.87 -0.0
249,768 + 0.3