Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_93

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_93: 8461 - ProSiteProfiles-BTB domain profile.-PS50097, at 219909 to 221427 8461 mRNA_94: 8462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 221579 to 223787 8462

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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219,036 + -0.3
219,050 - 1.2
219,077 + -1.0
219,109 + -2.1
219,176 + -1.6
219,207 + -0.2
219,221 - -1.2
219,225 + 0.3
219,234 + 0.6
219,236 + 1.5
219,244 + 1.6
219,245 - 0.9
219,250 + 2.1
219,252 + 0.0
219,255 - -0.0
219,263 - 1.1
219,275 + -0.2
219,278 - -0.5
219,287 - 0.9
219,294 - 2.2
219,393 + 1.1
219,399 - 0.3
219,406 - 1.1
219,408 - -1.0
219,508 - -1.7
219,529 + 1.6
219,532 + -0.4
219,542 - 0.0
219,546 - -0.5
219,547 + -0.7
219,668 - -0.4
219,669 - 0.5
219,672 + -0.5
219,999 + -0.2
220,132 - 8461 mRNA_93 0.15 -2.1
220,138 - 8461 mRNA_93 0.15 -0.4
220,415 - 8461 mRNA_93 0.33 -0.1
220,442 + 8461 mRNA_93 0.35 -0.1
221,592 - 0.4
221,611 + 0.4
221,664 + 1.0
221,749 + 0.4
222,058 + 8462 mRNA_94 0.22 0.0
222,064 - 8462 mRNA_94 0.22 0.7