Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_79

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185623 to 186207 8446 mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186706 to 188932 8447 mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189215 to 191649 8448

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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186,205 - -0.1
186,211 - 2.0
186,215 + 0.7
186,216 - 0.5
186,217 + 0.3
186,248 - 0.1
186,249 - 0.9
186,259 - 0.4
186,289 - 0.0
186,291 + 1.1
186,311 + -0.3
186,338 - -0.3
186,351 + 2.4
186,354 + 0.5
186,354 + 1.7
186,354 + 1.0
186,359 - -0.2
186,385 - -0.4
186,386 - 0.2
186,388 - 1.9
186,392 + 1.0
186,412 + 0.8
186,416 - 0.7
186,422 - 1.9
186,427 + 0.1
186,483 + -0.4
186,511 - -0.3
186,518 + 0.0
186,522 + 0.5
186,526 - 0.3
186,529 - 1.1
186,571 - -1.8
186,574 + 0.5
186,616 - 0.3
186,625 - -0.6
186,638 - 0.8
186,802 - 0.2
186,806 - 0.6
186,927 - -0.3
187,205 - 8447 mRNA_79 0.22 -0.8
187,392 - 8447 mRNA_79 0.31 1.8
188,059 + 8447 mRNA_79 0.61 2.9
188,292 - 8447 mRNA_79 0.71 -0.5
188,304 - 8447 mRNA_79 0.72 -0.6
188,379 - 8447 mRNA_79 0.75 1.1
188,544 + 8447 mRNA_79 0.83 -0.2
188,707 + 8447 mRNA_79 0.90 1.1
188,895 - -0.9
188,904 + 0.7
188,982 + 1.6
189,583 - 8448 mRNA_80 0.15 0.4