Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_73

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169827 to 173814 8441 mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174089 to 180350 8442

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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168,846 + 0.4
168,861 - -0.5
168,864 - -0.1
168,906 + 0.5
168,935 - -0.3
169,155 - 0.4
169,182 - -0.4
169,202 + 0.9
169,356 + 1.5
169,358 - -1.2
169,648 - -0.1
169,668 - 0.7
169,790 - -0.0
169,840 + 0.5
170,219 + 1.2
170,253 - 8441 mRNA_73 0.11 2.3
170,901 - 8441 mRNA_73 0.27 0.3
171,079 + 8441 mRNA_73 0.31 1.9
171,383 - 8441 mRNA_73 0.39 -0.4
171,551 - 8441 mRNA_73 0.43 -0.1
172,023 - 8441 mRNA_73 0.55 -0.0
172,280 - 8441 mRNA_73 0.62 1.6
172,438 - 8441 mRNA_73 0.65 0.4
172,739 + 8441 mRNA_73 0.73 0.4
172,751 - 8441 mRNA_73 0.73 1.1
172,813 - 8441 mRNA_73 0.75 0.8
172,962 + 8441 mRNA_73 0.79 -0.6
173,174 - 8441 mRNA_73 0.84 0.4
173,424 - 1.7
173,424 + 0.4
173,518 - 1.3
173,553 - 2.2
173,837 + 2.4
173,862 + 0.7
174,086 - 0.2
174,096 - 0.3
174,298 + -0.3
174,298 + 0.2
174,532 + 1.4
174,678 + 0.4