Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_62

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143371 to 144965 8429 mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145631 to 146829 8430 mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147081 to 148199 8431

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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144,635 + 8429 mRNA_61 0.79 0.1
144,738 + 8429 mRNA_61 0.86 -0.4
144,862 - 0.5
144,870 + 1.2
144,873 - 1.4
144,880 + -1.2
144,881 - 2.8
145,005 + 2.0
145,026 - 0.5
145,033 + 1.8
145,043 - 1.6
145,047 - 0.3
145,049 + -0.7
145,175 - 3.2
145,201 + -0.1
145,206 - 0.3
145,337 + 2.3
145,344 - -0.2
145,344 + 1.1
145,350 + -0.0
145,453 + 0.9
145,471 + -0.0
145,476 - -0.9
145,483 - -1.0
145,493 - 0.4
145,495 + -0.7
145,632 + -0.7
145,640 + 3.5
145,645 + 0.1
145,788 - 8430 mRNA_62 0.13 0.3
145,955 + 8430 mRNA_62 0.27 0.2
146,200 + 8430 mRNA_62 0.47 1.4
146,202 - 8430 mRNA_62 0.48 -0.8
146,370 - 8430 mRNA_62 0.62 -0.1
146,493 + 8430 mRNA_62 0.72 0.8
146,518 - 8430 mRNA_62 0.74 0.1
146,763 + 0.5
146,959 - 0.7
147,238 + 8431 mRNA_63 0.14 -0.2
147,279 - 8431 mRNA_63 0.18 0.5
147,308 + 8431 mRNA_63 0.20 1.2
147,574 + 8431 mRNA_63 0.44 0.7