Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8473

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8472: 16840 - KOG1769 Ubiquitin-like proteins, at 1310090 to 1310770 16840 mRNA_8473: 16841 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 1310898 to 1312321 16841 mRNA_8474: 16842 - Hypothetical Protein, at 1313231 to 1316089 16842

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,310,136 + 0.5
1,310,383 - 16840 mRNA_8472 0.43 0.3
1,310,397 + 16840 mRNA_8472 0.45 -0.1
1,310,401 + 16840 mRNA_8472 0.46 0.7
1,310,706 - 1.1
1,310,791 - -0.4
1,310,807 - 1.7
1,310,809 - -0.0
1,310,824 + 0.6
1,310,827 - 0.5
1,310,827 - -0.5
1,310,831 + -0.1
1,310,834 - 0.3
1,310,867 + 0.1
1,310,968 - -0.3
1,310,992 - 0.4
1,310,997 + 0.6
1,311,012 + -0.3
1,311,017 + 0.1
1,311,112 + 16841 mRNA_8473 0.15 -0.2
1,311,125 - 16841 mRNA_8473 0.16 0.3
1,311,140 - 16841 mRNA_8473 0.17 1.0
1,311,149 + 16841 mRNA_8473 0.18 0.2
1,311,154 - 16841 mRNA_8473 0.18 -0.3
1,311,157 - 16841 mRNA_8473 0.18 -1.8
1,311,311 + 16841 mRNA_8473 0.29 0.5
1,311,382 + 16841 mRNA_8473 0.34 0.9
1,311,404 + 16841 mRNA_8473 0.36 -0.2
1,311,443 - 16841 mRNA_8473 0.38 -0.9
1,311,601 + 16841 mRNA_8473 0.49 -0.8
1,311,731 - 16841 mRNA_8473 0.58 -1.2
1,311,877 + 16841 mRNA_8473 0.69 1.2
1,311,881 - 16841 mRNA_8473 0.69 1.4
1,311,921 + 16841 mRNA_8473 0.72 1.5
1,312,163 - 16841 mRNA_8473 0.89 1.3
1,312,172 + 16841 mRNA_8473 0.89 0.8
1,312,185 - 0.3
1,312,192 + -0.0
1,312,193 - 0.9
1,312,227 + 0.6
1,312,229 - 0.2
1,312,273 - -0.5
1,312,281 - -0.2
1,312,299 + 1.7
1,312,334 + -0.9
1,312,338 + 1.8
1,312,340 - 0.8
1,312,350 + 1.2
1,312,351 + 1.5
1,312,354 + -0.3
1,312,357 - 0.7
1,312,365 + 1.5
1,312,368 + 0.5
1,312,368 + 0.5
1,312,369 + 0.3
1,312,374 + -0.0
1,312,378 + 1.0
1,312,385 + 0.2
1,312,388 + 0.5
1,312,389 - 0.4
1,312,392 + 1.1
1,312,394 - 1.9
1,312,520 - -0.2
1,312,530 + -0.3
1,312,674 - 1.0
1,312,684 - -0.1
1,312,686 + 1.1
1,312,693 - 1.0
1,312,698 + 1.3
1,312,743 + -1.0
1,312,802 + 0.1
1,312,809 - -0.7