Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8458

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8457: 16825 - K02728 PSMA4 20S proteasome subunit alpha 3, at 1280934 to 1282715 16825 mRNA_8458: 16826 - Hypothetical Protein, at 1283609 to 1284091 16826 mRNA_8459: 16827 - SUPERFAMILY--SSF50685, at 1284392 to 1285740 16827

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,282,775 + 0.3
1,282,833 + 0.7
1,282,854 - 0.6
1,282,955 - -0.1
1,282,973 - 0.3
1,283,063 + 0.3
1,283,090 - 0.1
1,283,122 + 1.6
1,283,132 + 1.3
1,283,134 + 0.1
1,283,233 + 1.5
1,283,252 - 0.7
1,283,391 - -1.1
1,283,412 + 1.2
1,283,425 + 3.0
1,283,445 - -0.1
1,283,452 - 1.0
1,283,452 - 1.5
1,283,453 + -0.5
1,283,578 + -2.5
1,283,593 - -0.0
1,283,601 - 0.6
1,283,603 - -1.7
1,283,607 + -0.1
1,283,645 - 1.3
1,283,724 - 16826 mRNA_8458 0.24 0.3
1,283,747 + 16826 mRNA_8458 0.29 1.4
1,283,757 + 16826 mRNA_8458 0.31 2.5
1,283,770 + 16826 mRNA_8458 0.33 1.4
1,283,771 + 16826 mRNA_8458 0.34 -0.2
1,283,772 - 16826 mRNA_8458 0.34 -0.4
1,283,797 + 16826 mRNA_8458 0.39 1.0
1,283,882 - 16826 mRNA_8458 0.57 0.3
1,283,926 - 16826 mRNA_8458 0.66 -0.1
1,283,965 + 16826 mRNA_8458 0.74 -0.2
1,284,188 + -0.0
1,284,230 + 1.0
1,284,451 - -0.1
1,284,527 + 16827 mRNA_8459 0.10 0.8
1,284,552 + 16827 mRNA_8459 0.12 0.3
1,284,919 - 16827 mRNA_8459 0.39 1.5