Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8356

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8355: 16723 - KOG2111 Uncharacterized conserved protein, contains WD40 repeats, at 1016689 to 1018583 16723 mRNA_8356: 16724 - K13985 NAPEPLD N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D, at 1018843 to 1020921 16724 mRNA_8357: 16725 - K01739 metB cystathionine gamma-synthase, at 1021277 to 1023018 16725

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,018,241 - 16723 mRNA_8355 0.82 -0.3
1,018,242 + 16723 mRNA_8355 0.82 1.4
1,018,266 + 16723 mRNA_8355 0.83 -0.7
1,018,539 - 1.8
1,018,701 - 0.6
1,018,707 - 0.4
1,018,714 + 0.1
1,018,971 - -0.8
1,019,012 + -0.1
1,019,107 - 16724 mRNA_8356 0.13 0.4
1,019,129 - 16724 mRNA_8356 0.14 0.2
1,019,161 - 16724 mRNA_8356 0.15 1.1
1,019,161 - 16724 mRNA_8356 0.15 -0.4
1,019,190 + 16724 mRNA_8356 0.17 1.0
1,019,228 + 16724 mRNA_8356 0.19 -0.8
1,019,589 - 16724 mRNA_8356 0.36 0.0
1,019,725 + 16724 mRNA_8356 0.42 -0.4
1,019,859 - 16724 mRNA_8356 0.49 0.0
1,019,873 + 16724 mRNA_8356 0.50 -0.6
1,020,023 - 16724 mRNA_8356 0.57 -0.6
1,020,027 + 16724 mRNA_8356 0.57 2.2
1,020,177 + 16724 mRNA_8356 0.64 0.5
1,020,317 - 16724 mRNA_8356 0.71 0.4
1,020,345 + 16724 mRNA_8356 0.72 0.7
1,020,455 + 16724 mRNA_8356 0.78 0.0
1,020,581 - 16724 mRNA_8356 0.84 -0.3
1,020,588 + 16724 mRNA_8356 0.84 0.5
1,020,600 - 16724 mRNA_8356 0.85 -0.1
1,020,752 + 1.0
1,020,993 - 1.3
1,021,056 - 0.2
1,021,082 + 1.5
1,021,157 - 0.3
1,021,158 + 0.7
1,021,169 + 0.0
1,021,196 - -0.9
1,021,208 - 0.4
1,021,246 + 0.2
1,021,249 - 0.2
1,021,338 + 0.2
1,021,378 - 1.0
1,021,782 + 16725 mRNA_8357 0.29 0.7