Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8293

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8292: 16660 - HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694, at 864726 to 865561 16660 mRNA_8293: 16661 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339, at 865837 to 868084 16661 mRNA_8294: 16662 - Hypothetical Protein, at 869009 to 869206 16662

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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864,864 + 16660 mRNA_8292 0.17 0.7
864,867 - 16660 mRNA_8292 0.17 0.1
864,870 - 16660 mRNA_8292 0.17 1.0
864,876 - 16660 mRNA_8292 0.18 0.1
864,898 + 16660 mRNA_8292 0.21 0.6
864,981 + 16660 mRNA_8292 0.31 0.3
865,030 + 16660 mRNA_8292 0.36 1.0
865,094 + 16660 mRNA_8292 0.44 1.2
865,297 + 16660 mRNA_8292 0.68 1.3
865,338 + 16660 mRNA_8292 0.73 0.6
865,417 + 16660 mRNA_8292 0.83 0.3
865,727 - -0.6
865,881 + 0.6
865,904 + 0.6
866,010 - 0.5
866,010 - -1.3
866,756 + 16661 mRNA_8293 0.41 0.5
867,202 + 16661 mRNA_8293 0.61 2.1
867,447 + 16661 mRNA_8293 0.72 0.6
867,642 - 16661 mRNA_8293 0.80 0.5
867,770 + 16661 mRNA_8293 0.86 0.4
867,931 - -0.3
867,942 - -2.3
867,969 + 0.2
867,980 + 0.3
868,106 - 0.1
868,114 - 0.5
868,225 - 0.3
868,226 + 1.4
868,236 + -0.2
868,238 + -0.4
868,254 - -0.1
868,258 - 1.1
868,265 - 1.8
868,279 + 1.3
868,301 + 0.1
868,303 - 0.9
868,304 + 0.4
868,423 - 0.3
868,426 - 1.1
868,444 - 0.3
868,468 - 0.1
868,536 - -0.2
868,542 + 2.9
868,567 + -0.2
868,572 + -0.3
868,662 + 0.9
868,687 - 0.4
868,711 - 0.4
868,840 - 1.4
868,972 + 0.2
869,045 + 16662 mRNA_8294 0.18 0.2
869,061 - 16662 mRNA_8294 0.26 0.5