Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8275

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8274: 16642 - KOG4080 Mitochondrial ribosomal protein L32, at 819510 to 820015 16642 mRNA_8275: 16643 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 820228 to 822470 16643 mRNA_8276: 16644 - K06630 YWHAE 14-3-3 protein epsilon, at 822982 to 824358 16644

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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819,279 - -0.0
819,312 + -0.1
819,317 + 0.2
820,023 - -0.2
820,176 + -0.9
820,579 - 16643 mRNA_8275 0.16 -0.7
820,625 - 16643 mRNA_8275 0.18 -0.9
821,382 + 16643 mRNA_8275 0.51 1.0
821,618 + 16643 mRNA_8275 0.62 -0.5
821,665 - 16643 mRNA_8275 0.64 0.7
821,770 - 16643 mRNA_8275 0.69 -1.6
821,911 - 16643 mRNA_8275 0.75 0.3
821,924 - 16643 mRNA_8275 0.76 -1.2
822,191 - 16643 mRNA_8275 0.88 -1.7
822,211 - 16643 mRNA_8275 0.88 1.2
822,229 - 16643 mRNA_8275 0.89 -1.4
822,234 + 16643 mRNA_8275 0.89 0.0
822,369 + -0.8
822,374 + -1.6
822,395 - -0.7
822,487 - 1.7
822,525 + -0.3
822,661 + 0.5
822,763 - 0.7
822,776 - -0.3
822,776 - 0.2
822,785 + 1.6
822,791 + -0.2
822,795 + 0.8
822,796 - 0.2
822,800 - 1.5
822,804 - 1.5
822,938 - 0.7
822,940 - 1.7
822,947 + -0.1
822,955 - -0.1
822,955 + 1.4
822,956 - 1.4
822,969 + 3.0
822,969 + 0.9
822,973 + 0.5
823,080 - 0.9
823,083 + -0.2
823,085 - 0.4
823,094 - 0.7
823,096 - 0.4
823,104 + 0.0
823,108 + 0.2
823,110 + 0.5
823,110 + 1.1
823,115 - 1.5
823,116 - 0.5
823,116 - 0.7
823,122 + 16644 mRNA_8276 0.10 0.8
823,137 - 16644 mRNA_8276 0.11 0.3
823,144 + 16644 mRNA_8276 0.12 -0.2
823,233 - 16644 mRNA_8276 0.18 0.4
823,254 + 16644 mRNA_8276 0.20 2.0
823,272 - 16644 mRNA_8276 0.21 0.6
823,275 - 16644 mRNA_8276 0.21 0.3
823,280 + 16644 mRNA_8276 0.22 0.6
823,291 - 16644 mRNA_8276 0.22 0.4
823,307 + 16644 mRNA_8276 0.24 -0.7
823,409 - 16644 mRNA_8276 0.31 3.2