Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8210

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8209: 16577 - K17618 UBLCP1 ubiquitin-like domain-containing CTD phosphatase 1, at 674405 to 676070 16577 mRNA_8210: 16578 - BLAST WetA [Penicillium camemberti], at 676267 to 678027 16578

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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675,373 - 16577 mRNA_8209 0.58 1.2
675,672 - 16577 mRNA_8209 0.76 0.9
675,689 + 16577 mRNA_8209 0.77 0.8
675,805 - 16577 mRNA_8209 0.84 0.1
675,818 - 16577 mRNA_8209 0.85 -0.4
675,822 + 16577 mRNA_8209 0.85 0.2
675,966 - -0.3
675,975 - 0.3
676,113 - -0.8
676,117 - 0.3
676,121 + 0.1
676,125 - 0.9
676,132 + 1.0
676,134 - 1.2
676,157 + -0.3
676,157 - 0.2
676,458 + 16578 mRNA_8210 0.11 -0.0
676,878 - 16578 mRNA_8210 0.35 0.2
677,204 + 16578 mRNA_8210 0.53 2.2
677,730 - 16578 mRNA_8210 0.83 0.8
677,883 - -0.0
677,937 + 0.6
677,959 + 2.7
678,097 - 0.1
678,153 + 1.0
678,166 - 1.3
678,192 - 0.6
678,207 - 0.2
678,232 + 1.5
678,286 - 0.8
678,319 - 1.0
678,330 - -0.1
678,363 + -0.3
678,364 - 0.4
678,367 - 1.5
678,367 - 0.7
678,370 + 0.4
678,373 - 1.5
678,375 - -0.6
678,399 - 0.4
678,412 - -1.1
678,419 + -0.4
678,427 + 1.0
678,524 + -0.2
678,549 - -0.8
678,688 + 0.1
678,695 + 0.4
678,697 - 0.4
678,703 + -0.3
678,725 + -0.0
678,772 + 1.8
678,839 - 0.6
678,849 - -0.5
678,859 + 2.0
678,982 - -0.8
679,000 - 0.4
679,009 - -0.8
679,024 - -0.4