Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8072

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8071: 16439 - Hypothetical Protein, at 357161 to 359241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359607 to 361273 16440 mRNA_8073: 16441 - Hypothetical Protein, at 361679 to 362906 16441

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
358,676 - 16439 mRNA_8071 0.73 1.3
358,979 - 16439 mRNA_8071 0.87 -0.1
358,991 + 16439 mRNA_8071 0.88 0.1
359,119 - 0.2
359,134 + 3.5
359,162 + 0.4
359,279 + 0.6
359,286 - 0.4
359,300 - 1.6
359,420 + 0.2
359,431 - -1.5
359,431 + 1.7
359,447 - 0.7
359,698 - -0.3
359,744 + 0.5
359,748 - 1.3
360,047 - 16440 mRNA_8072 0.26 -0.4
360,146 - 16440 mRNA_8072 0.32 2.0
360,172 - 16440 mRNA_8072 0.34 0.8
360,889 - 16440 mRNA_8072 0.77 0.3
361,166 + 1.0
361,170 - 0.1
361,183 - -0.3
361,192 + 2.1
361,195 - 0.8
361,309 + 0.5
361,310 - -0.2
361,329 + -0.8
361,329 + 0.6
361,337 - 0.3
361,342 + -0.4
361,459 + 0.2
361,466 - -0.5
361,477 - -0.3
361,481 + -0.1
361,482 - 1.6
361,486 - 0.4
361,489 - 0.0
361,493 - -0.2
361,494 + -0.7
361,496 - 0.2
361,501 + 0.7
361,503 - -0.2
361,606 + 1.6
361,613 - -1.1
361,615 - 1.8
361,616 - 0.9
361,616 - 0.9
361,627 - 0.2
361,633 - -0.1
361,639 - -0.0
361,641 + 0.4
361,641 + 0.6
361,643 + -0.9
361,652 - 0.4
361,655 + -1.0
361,749 - -0.2
361,760 - 2.1
361,764 - -0.3
361,767 - 0.5
361,779 - -0.0
361,788 + -0.1
361,796 - 0.8
361,801 - -1.1
361,802 + 16441 mRNA_8073 0.10 0.5
361,803 + 16441 mRNA_8073 0.10 -0.2
361,804 + 16441 mRNA_8073 0.10 0.1
361,929 - 16441 mRNA_8073 0.20 0.1
361,934 + 16441 mRNA_8073 0.21 1.1
361,941 - 16441 mRNA_8073 0.21 -0.0
361,941 - 16441 mRNA_8073 0.21 -0.3
361,954 + 16441 mRNA_8073 0.22 -0.4
362,107 - 16441 mRNA_8073 0.35 2.2
362,108 - 16441 mRNA_8073 0.35 1.9