Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7882

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7882: 16250 - HMMPfam-Protein of unknown function (DUF4243)-PF14027, at 1289991 to 1293240 16250 mRNA_7883: 16251 - Hypothetical Protein, at 1293902 to 1295426 16251

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,289,663 - 1.1
1,289,805 + -0.3
1,289,809 + 0.5
1,289,811 - -1.0
1,289,815 + 0.3
1,289,819 + -0.4
1,289,952 - 0.2
1,290,092 - 0.6
1,290,096 + 0.9
1,290,102 + -0.4
1,290,284 + 1.2
1,290,412 - 16250 mRNA_7882 0.13 1.4
1,291,241 - 16250 mRNA_7882 0.38 2.0
1,291,305 + 16250 mRNA_7882 0.40 -0.5
1,291,713 - 16250 mRNA_7882 0.53 0.1
1,291,747 - 16250 mRNA_7882 0.54 0.6
1,291,843 - 16250 mRNA_7882 0.57 2.3
1,292,178 + 16250 mRNA_7882 0.67 -0.2
1,292,281 - 16250 mRNA_7882 0.70 -0.1
1,292,569 - 16250 mRNA_7882 0.79 -0.0
1,292,678 + 16250 mRNA_7882 0.83 -0.8
1,293,319 + 1.6
1,293,373 + -1.3
1,293,453 - 0.8
1,293,474 + -0.2
1,293,507 + 0.2
1,293,561 - 1.2
1,293,580 + -0.5
1,293,594 + 1.2
1,293,597 - 1.3
1,293,632 - -0.3
1,293,637 - -2.2
1,293,641 + 0.4
1,293,645 + 0.8
1,293,649 + 0.5
1,293,652 + 0.2
1,293,659 - -0.0
1,293,666 + 2.2
1,293,669 + -0.5
1,293,676 + -0.1
1,293,677 - -1.1
1,293,680 + 0.7
1,293,682 - 0.3
1,293,696 - 0.1
1,293,708 + -0.3
1,293,823 + 1.7
1,293,824 - -1.0
1,293,825 - 0.4
1,293,839 - 1.4
1,293,843 - -0.0
1,293,852 + 0.4
1,293,857 + -0.6
1,293,858 - 0.8
1,293,871 + -0.1
1,293,873 - 0.7
1,293,973 - 0.3
1,294,122 + 16251 mRNA_7883 0.14 0.1
1,294,151 + 16251 mRNA_7883 0.16 -1.1
1,294,168 + 16251 mRNA_7883 0.17 1.4
1,294,182 + 16251 mRNA_7883 0.18 0.4