Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7692

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849187 to 849939 16059 mRNA_7692: 16060 - HMMPfam-Cell division control protein 14, SIN component-PF08045, at 850554 to 851989 16060 mRNA_7693: 16061 - SUPERFAMILY--SSF57701, at 852118 to 853465 16061

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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849,594 + 16059 mRNA_7691 0.54 -0.6
849,830 + 16059 mRNA_7691 0.85 2.1
849,977 + 0.4
849,985 + 3.1
850,133 + -0.5
850,274 - 0.5
850,289 + 0.4
850,299 + 0.2
850,419 - 1.1
850,582 - 2.5
850,711 - 16060 mRNA_7692 0.11 1.0
850,732 + 16060 mRNA_7692 0.12 0.9
850,765 + 16060 mRNA_7692 0.15 -1.8
851,009 + 16060 mRNA_7692 0.32 -0.1
851,102 + 16060 mRNA_7692 0.38 -0.2
851,138 - 16060 mRNA_7692 0.41 0.2
851,147 - 16060 mRNA_7692 0.41 0.2
851,267 + 16060 mRNA_7692 0.50 0.7
851,302 - 16060 mRNA_7692 0.52 1.6
851,324 + 16060 mRNA_7692 0.54 0.8
851,324 + 16060 mRNA_7692 0.54 0.6
851,453 - 16060 mRNA_7692 0.63 -0.3
851,585 - 16060 mRNA_7692 0.72 -0.2
851,599 + 16060 mRNA_7692 0.73 1.2
851,624 - 16060 mRNA_7692 0.75 1.3
851,628 - 16060 mRNA_7692 0.75 0.7
851,637 + 16060 mRNA_7692 0.75 0.0
851,878 + -0.3
851,878 + -1.1
851,878 + 0.8
852,031 + 0.2
852,048 - 0.8
852,076 + 0.2
852,284 + 16061 mRNA_7693 0.12 -0.5
852,483 - 16061 mRNA_7693 0.27 -0.9
852,483 + 16061 mRNA_7693 0.27 0.7
852,550 + 16061 mRNA_7693 0.32 -0.5
852,551 + 16061 mRNA_7693 0.32 -0.3
852,663 - 16061 mRNA_7693 0.40 -0.5
852,891 - 16061 mRNA_7693 0.57 -0.5
852,947 - 16061 mRNA_7693 0.61 -0.6