Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7607

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7606: 15974 - Hypothetical Protein, at 664256 to 665164 15974 mRNA_7607: 15975 - BLAST UPF0428 CXorf56-like protein, putative [Rhizoctonia s..., at 665409 to 666288 15975 mRNA_7608: 15976 - K10847 XPA DNA-repair protein complementing XP-A cells, at 666565 to 667853 15976

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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664,494 + 15974 mRNA_7606 0.26 1.9
664,497 + 15974 mRNA_7606 0.27 0.1
664,795 - 15974 mRNA_7606 0.59 -0.7
664,926 + 15974 mRNA_7606 0.74 -0.2
665,086 - -0.4
665,222 - -0.1
665,362 - 1.3
665,362 - -0.0
665,375 + 1.4
665,396 - 0.7
665,511 + 15975 mRNA_7607 0.12 0.4
665,519 - 15975 mRNA_7607 0.12 1.4
665,541 - 15975 mRNA_7607 0.15 0.7
665,546 + 15975 mRNA_7607 0.16 0.8
665,668 + 15975 mRNA_7607 0.29 -0.6
665,673 - 15975 mRNA_7607 0.30 2.3
665,679 + 15975 mRNA_7607 0.31 1.5
665,685 + 15975 mRNA_7607 0.31 0.1
665,834 - 15975 mRNA_7607 0.48 0.8
666,224 - -0.2
666,667 - -0.4
666,668 + 0.8
666,675 + -2.8
666,676 + -0.1
666,678 + 1.9
666,708 - 15976 mRNA_7608 0.11 -0.1
666,841 + 15976 mRNA_7608 0.21 2.0
667,141 + 15976 mRNA_7608 0.45 1.6
667,180 + 15976 mRNA_7608 0.48 0.9