Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7532

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7531: 15899 - K14001 SIL1, SLS1 nucleotide exchange factor SIL1, at 504183 to 505474 15899 mRNA_7532: 15900 - K01896 ACSM medium-chain acyl-CoA synthetase, at 505603 to 507822 15900 mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507910 to 511338 15901

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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505,234 + 15899 mRNA_7531 0.81 0.3
505,475 + 1.0
505,476 - 0.4
505,476 - -0.1
505,491 + 1.1
505,493 - -1.8
505,494 - 3.0
505,499 + 0.7
505,510 - -0.2
505,515 - 2.5
505,519 + 1.3
505,521 - 0.6
505,529 - -1.0
505,582 + 1.6
506,048 - 15900 mRNA_7532 0.20 0.8
506,369 - 15900 mRNA_7532 0.35 0.8
507,139 - 15900 mRNA_7532 0.69 -0.2
507,450 - 15900 mRNA_7532 0.83 0.9
508,026 + -0.8
508,225 - -0.1
508,552 - 15901 mRNA_7533 0.19 0.9
508,608 - 15901 mRNA_7533 0.20 -0.2