Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7485

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392851 to 393989 15852 mRNA_7485: 15853 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 394901 to 397101 15853 mRNA_7486: 15854 - K08287 E2.7.12.1 dual-specificity kinase, at 397692 to 399920 15854

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
393,966 - 1.1
393,982 + 0.5
393,983 - 0.6
393,984 + 2.3
393,988 + -0.1
394,000 + 0.4
394,114 - 0.4
394,116 - 0.1
394,134 + 0.2
394,139 + -0.2
394,154 + 1.6
394,262 - 2.1
394,264 - -0.1
394,283 - -0.5
394,285 - 0.8
394,299 - 0.7
394,302 - 0.1
394,306 + -0.7
394,310 + 0.1
394,313 + 0.1
394,324 + 0.1
394,435 + -0.1
394,473 + -0.2
394,598 + 0.4
394,602 + -0.1
394,620 + -0.2
394,891 + -1.1
394,898 + 0.1
395,011 + 1.1
395,794 + 15853 mRNA_7485 0.41 0.3
395,882 - 15853 mRNA_7485 0.45 -0.4
395,887 - 15853 mRNA_7485 0.45 0.1
396,325 - 15853 mRNA_7485 0.65 -0.5
396,523 + 15853 mRNA_7485 0.74 -0.3
396,655 - 15853 mRNA_7485 0.80 1.5
396,834 - 15853 mRNA_7485 0.88 0.2
396,963 + 0.5
397,419 + 0.2
397,569 - 0.2
397,592 + 0.5
397,728 + 0.7
397,810 + -0.3
397,887 - -1.0