Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7427

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794 mRNA_7427: 15795 - SUPERFAMILY--SSF51197, at 248497 to 250090 15795

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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247,539 - 15794 mRNA_7426 0.81 1.6
247,622 + 15794 mRNA_7426 0.90 0.5
247,624 - 15794 mRNA_7426 0.90 0.8
247,635 - 0.5
247,635 - -0.3
247,638 - 0.1
247,649 - -1.5
247,653 + 1.3
247,714 - -0.1
247,724 - 0.1
247,727 - -0.4
247,738 - -0.1
247,739 - -0.5
247,749 + -0.1
247,750 - 1.1
247,750 + 0.1
247,753 + -0.8
247,756 + 0.2
247,757 + -1.2
247,762 - 1.8
247,766 - -0.8
247,767 + 1.4
247,781 + -0.7
247,792 - 0.7
247,793 + -0.7
247,794 + -0.1
247,796 + 0.1
247,799 - 0.0
247,800 + 0.3
247,826 - 0.1
247,833 + 0.2
247,846 + 0.2
247,860 + 1.3
247,865 + 1.3
247,866 - 0.2
247,871 + -0.7
247,884 + 0.4
247,885 - 0.7
247,887 + 0.3
247,888 - 0.7
247,889 - 0.5
247,892 + 1.4
247,892 - 0.1
247,895 + 0.2
247,898 - -0.4
247,919 + 0.3
247,925 + 0.3
247,925 + 1.0
247,927 + 0.4
247,935 + -1.0
247,935 - -0.1
247,935 + 0.1
247,936 - 1.7
247,936 - 0.6
247,965 + 0.1
247,982 - -0.4
247,995 + 0.7
247,996 - 0.7
248,053 - 1.1
248,055 + -0.3
248,059 - 0.0
248,065 - 1.5
248,067 + 0.0
248,072 + 0.6
248,081 - 1.1
248,082 - 0.1
248,083 - 0.6
248,086 + 2.1
248,087 - 1.2
248,128 + 0.2
248,151 - 1.0
248,173 - 0.1
248,187 - 0.3
248,193 - 0.8
248,198 + 0.7
248,210 + -2.3
248,221 - -1.5
248,232 + 0.5
248,346 + 1.4
248,393 - 1.5
248,798 + 15795 mRNA_7427 0.19 -1.0
249,262 + 15795 mRNA_7427 0.48 0.6
249,387 + 15795 mRNA_7427 0.56 0.3
249,388 + 15795 mRNA_7427 0.56 -0.4
249,413 - 15795 mRNA_7427 0.57 1.5
249,536 - 15795 mRNA_7427 0.65 3.8
249,708 + 15795 mRNA_7427 0.76 -1.4
249,973 + 1.3
250,117 - -0.1
250,193 + 0.2
250,239 - -0.0
250,361 + -1.9
250,414 + 1.7
250,504 - 0.4
250,528 - 3.0
250,587 + -0.2
250,694 + -2.5
250,710 + 1.4
250,745 - 0.9
250,782 + -0.0
250,806 - 1.3
250,838 + -0.0
250,838 - 0.4
250,854 + 0.2
250,957 - -0.6
250,958 - -0.2
250,963 + -1.5
250,964 + 0.1
250,973 + 2.2
250,983 + -0.8