Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7291

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7290: 15658 - HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088,SMART-TEA domain-SM00426, at 1307744 to 1309291 15658 mRNA_7291: 15659 - K16803 CKAP5, XMAP215 cytoskeleton-associated protein 5, at 1309556 to 1318572 15659 mRNA_7292: 15660 - SUPERFAMILY--SSF56112, at 1318921 to 1320950 15660

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,308,944 - 15658 mRNA_7290 0.78 0.9
1,309,093 + 15658 mRNA_7290 0.87 0.8
1,309,260 + 1.3
1,309,346 + 0.8
1,309,418 - 1.2
1,309,423 + 1.6
1,309,428 + -0.9
1,309,460 + 1.6
1,309,702 - -0.2
1,309,851 - 1.0
1,309,860 + 1.8
1,309,947 - -0.8
1,310,130 + 1.3
1,310,160 + 1.1
1,310,311 + 1.3
1,310,500 + 15659 mRNA_7291 0.10 2.4
1,311,124 + 15659 mRNA_7291 0.17 0.8
1,311,825 - 15659 mRNA_7291 0.25 0.5
1,312,453 - 15659 mRNA_7291 0.32 2.3
1,312,601 - 15659 mRNA_7291 0.34 -1.6
1,312,601 + 15659 mRNA_7291 0.34 1.4
1,313,172 - 15659 mRNA_7291 0.40 0.3
1,317,071 - 15659 mRNA_7291 0.83 -1.0
1,317,081 - 15659 mRNA_7291 0.83 1.7
1,317,126 - 15659 mRNA_7291 0.84 -0.2
1,317,187 - 15659 mRNA_7291 0.85 1.3
1,317,221 + 15659 mRNA_7291 0.85 -0.3
1,317,245 + 15659 mRNA_7291 0.85 -0.6
1,317,349 + 15659 mRNA_7291 0.86 1.9
1,317,353 - 15659 mRNA_7291 0.86 0.9
1,317,668 + 15659 mRNA_7291 0.90 -0.0
1,317,674 + 0.9
1,317,912 - -0.0
1,318,197 - 0.5
1,318,204 - -1.4
1,318,323 + -1.0
1,318,355 + 0.6
1,318,631 - 1.8
1,318,640 - 0.6
1,318,785 - 1.5
1,318,794 + -1.0
1,318,803 - -1.0
1,318,942 + -2.0
1,319,053 + 0.3
1,319,080 - 1.2
1,319,106 - 0.8
1,319,321 - 15660 mRNA_7292 0.20 -0.2
1,319,365 + 15660 mRNA_7292 0.22 0.6
1,319,514 + 15660 mRNA_7292 0.29 0.9